bcftools extract information
# Example usage:
bcftools query --format '%CHROM\t%POS\t%INFO/END\t[%GT]\n' input_file.vcf
# Where:
# - Fixed columns like CHROM and POS are referred to as %COLUMN
# - Info fields need to be specified as %INFO/TAG
# - Format fields need to be enclosed in brackets
# - The tab \t and new line \n characters are used to format the output
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